Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSIEKQVAEQLLEIKAVFLKPNEPFTWASGIKSPIYCDNRLTLGFPKVRQFIAKSLAEKIKQTFGEIDVVAGTATAGIPHAAWVSDLLDLPMVYVRSKAKEHGKGNQIEGPISKGQKVVVIEDLISTGGSSLKAVEALEEAGAEVVGIAAIFTYGLAKGKQLLEESGTKLVTLTNYDELIEVALNENYVTGEDMETLKEWKKNPEKWGK
2AEE Chain:A ((3-209))
MTLASQIATQLLDIKAVYLKPEDPFTWASGIKSPIYTDNRVTLSYPKTRDLIENGFVETIKAHFPEVEVIAGTATAGIPHGAIIADKMTLPFAYIRSKPK----GNQIEGRVLKGQKMVIIEDLISTGGSVLDAAAAASREGADVLGVVAIFTYELPKASQNFKEAGIKLITLSNYTELIAVAKLQGYITNDGLHLLKKFKEDQVNW--
General information:
TITO was launched using:
RESULT:
Template:
2AEE.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -134768 for 1701 contacts (-79.2/contact) +
2D Compatibility (PS) -22575 + (NN) -11623 + (LL) -68
1D Compatibility (HY) -22000 + (ID) 5750
Total energy: -196784.0 ( -115.69 by residue)
QMean score : 0.637
(partial model without unconserved sides chains):
PDB file :
Tito_2AEE.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2AEE-query.scw
PDB file :
Tito_Scwrl_2AEE.pdb
: