Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSVHIEAKQGEIAETILLPGDPLRAKYIAETFLEDVVLFNQVRGMLGFTGTYKGEKVSVMGTGMGIPSISIYVNELIQSYDVKNLIRVGTMGGIQADVKVRDVVIAQAASTDSQINRNTFAGVDFAPVADFSLLKKAYDAGIEKGLSLKVGNVFSADRFYNDQLDK-QQLADYGVLGIEMEAAALYTLAQKYGRRALAILTVSDHIFTGEETSAEERQTTFNDMIVVALEAAIK
3UAZ Chain:A ((2-234))
-SVHIEAKQGEIAESILLPGDPLRAKYIAETFLEDVTCYNNVRGMLGFTGTYKGKRVSVQGTGMGVPSISIYVNELIQSYGVKNLIRVGTCGAIQKDVKVRDVIIAMTACTDSNMNRLTFPGFDFAPAANFDLLKKAYDAGTEKGLHVRVGNVLTADVFYRESMDMVKKLGDYGVLAVEMETTALYTLAAKYGVNALSVLTVSNHIFTGEETTSEERQTTFNEMIEIALDAAIQ
General information:
TITO was launched using:
RESULT:
Template:
3UAZ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -169170 for 2050 contacts (-82.5/contact) +
2D Compatibility (PS) -24417 + (NN) -3673 + (LL) 208
1D Compatibility (HY) -29600 + (ID) 8750
Total energy: -235402.0 ( -114.83 by residue)
QMean score : 0.576
(partial model without unconserved sides chains):
PDB file :
Tito_3UAZ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3UAZ-query.scw
PDB file :
Tito_Scwrl_3UAZ.pdb
: