Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MEVFVDGASAGNPGPSGAGIVLKADGIYEQFAIPLAVMTNHEAEFIAIKLGLEEALKKQATLIRLYSDSKVAIEAI-------HKRHAKNPLFKP--HLDAILEMADSLELFFAEWRNVS------QNKQADQLARQAIKKQKQPGVK
1F21 Chain:A ((5-140))
VEIFTDGSALGNPGPGGYGAILRYRGREKTFSAGYTRTTNNRMELMAAIVAL-EALKEHAEVI-LSTDSQYVRQGITQWIHNWKKRGWKTADKKPVKNVDLWQRLDAALGQHQIKWEWVKGHAGHPENERADELARAA----------
General information:
TITO was launched using:
RESULT:
Template:
1F21.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -56229 for 918 contacts (-61.3/contact) +
2D Compatibility (PS) -13021 + (NN) -6203 + (LL) 784
1D Compatibility (HY) -3200 + (ID) 2250
Total energy: -80119.0 ( -87.28 by residue)
QMean score : 0.498
(partial model without unconserved sides chains):
PDB file :
Tito_1F21.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1F21-query.scw
PDB file :
Tito_Scwrl_1F21.pdb
: