Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNGKQVMVGGLSLLLVGAGLGAFGSTAQAATDDASVMPDISNKQVLVGYWHSWKSSGKDGYQQGTSADIALKDTPKAYNVVDVSFMKGDGV--NRIPTFK---PVGINDSDFRAQVGALNKEGRAVLLALGGADGHVELKAGDEEAFANEIIRQVETYGFDGLDIDLEQSAITAGDNKTVIPAALKIVKDHYKAEGKNFLITMAPEFPYLKPGSAYESYLTSLANYYDYIAPQLYNQGGDGVWVDETNQWIAQNNDTLKESFLYYMADSFINGTRGYLKIPANKFVFGLPANVDAAATGYVTDPQIVKNVFTRLQAKGTPVKGIMTWSVNWDAGKNKAGVPYNNSFSNAYGPIVGTK |
| 4HMD Chain:A ((7-316)) | -----------------------------------------DDNVVVGYWHNW-CDGR-GYQGGNAPCVELKTVNPQYNVVNISFMKVYDIAEGRIPTFKLDPTIALSEAEFIAQIDTLNSQGRSVLIALGGADAHIELTRGDEDALAAEIIRLTDLYGFDGLDIDLEQAAITAKDNQFVIPAALKMVKEHYRKTGDNFMITMAPEFPYLTANGAYTPYLTELDGYYDFINPQFYNQGGDGLWI-EGVGWIAQNNDALKEEFIYYIADSLINGTRNYHKIPHDKLVFGLPSNIDAAATGYIQDPQDLYKAFDRLKAQGQPLRGVMTWSVNWDMGTDAANNSYNQQFIKDYGNFI--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4HMD.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -160558 for 2616 contacts (-61.4/contact) +
2D Compatibility (PS) -32917 + (NN) -16195 + (LL) 1972
1D Compatibility (HY) -36800 + (ID) 9100
Total energy: -253598.0 ( -96.94 by residue)
QMean score : 0.607
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