Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MYLCENENAYRRRNSGNLEIEMSEITLRNRKPKRKIGKWIAIILGIIIVLVVAAFLYFRYAEKPVTNAETEALDRISGQVDLKTTDQFYLYNGPKEVYYVLTGKNSKNKNIIVWVPKKKSDKVYVKFASDGITEQQARD-----KVTKEKKPKKILHVNLGMEKETPIWEVAYLDKNDKLNYFDINFETGEWYREIENL |
2HEN Chain:A ((30-120)) | ------------------------------------------------------------------------------------------------------------------LPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSLDSF---------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2HEN.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -7364 for 290 contacts (-25.4/contact) +
2D Compatibility (PS) -6822 + (NN) -2145 + (LL) 10128
1D Compatibility (HY) -4000 + (ID) 850
Total energy: -11053.0 ( -38.11 by residue)
QMean score : 0.363
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