Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | VVKTRKEKREYEEPADYDMSSEGQDEFNNEPPMLSRSDSRRGKKKTIFRYPLLNLLIVFFLLIPIVIVIVFVTVQNMGSSNEVKTETESTVNVSDNTQSKEEKEKAKKAAEEKAAAEK---AAEEKKAAAEKAEADKKK------------QEEDAVKAANAKKEQEAAEEKAAADKAAAEK-AAAEKAEQQKANEASQQKAGGSHTVKAGDTLYSIARSTYGQAGAAAGVEKIKQANGLGSDNVPVGTVLTIPQ |
| 4NC3 Chain:A ((201-343)) | ----------------------------------------------------------FFTPLAIMIVTYFLTIHALQKKAADLEDNWETLN--DNLKV---IEKADNAAQVKDALTKMRA------------------KDFRHGFDILVGQIDDALKLANEGKVKEA---QAAAEQLKTTRNAYIQKYLQTISNEQRASKVLG--------------------------------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4NC3.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) 62148 for 604 contacts (102.9/contact) +
2D Compatibility (PS) -11888 + (NN) -9199 + (LL) 8276
1D Compatibility (HY) -4000 + (ID) 1900
Total energy: 43437.0 ( 71.92 by residue)
QMean score : 0.427
|
|
|