Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MVEMNFKVDAFEGPLDLLLHLIGQLEVDIYDIPMA---EITDQYMEFVHTMQEMELDVASEYLVMAATLLAIKSKMLLPKQELEIDY----DTLEEEEDPRDALVEKLMEYKR-----FKEAAKELKEKE-------AERSFYFSKPPMDLAEYDDGTKVAELDVSLNDMLSAFNKMLRRKKLNKPLHTRITTQEISIDQRMDSVLEKLNLQVNHRLRFDELFEEQTKEQLVVTFLALLELMKRKLVEVEQAESFADLYVQGKGEEIS |
| 2AKA Chain:B ((129-258)) | -----------------LVDLPGMTKVPVGDQPPDIEFQIRDMLMQFVTKENCLILAVSPANSDLANSDALKIAKEVDPQGQRTIGVITKLDLMDEGTDARDVLENKLLPLRRGYIGVVNRSQKDIDGKKDITAALAAERKFFLSHP------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2AKA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 7595 for 599 contacts (12.7/contact) +
2D Compatibility (PS) -10726 + (NN) 2696 + (LL) 11912
1D Compatibility (HY) -4400 + (ID) 1700
Total energy: 5377.0 ( 8.98 by residue)
QMean score : 0.132
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