Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKDLHTDNLQISYDKRIIVDGLDIAIPANKITALVGANGSGKSTILKTMSRLMKPSKGAVYLDGKTIHSQPT--RDVAKQLAILPQNPSAP-DGLTVFELISYGRSPHQSSFKSITAKDREIIFWSLRVTNLT-EFADRPIDSLSGGQRQRAWIAMALAQETDVLFLDEPTTFLDMTHQLDVLNLLKQLNQSENRTIVMVVHDLNHASRYAHHMIAIKEGKVIAEGTPTSVMTE-QTLEDVFNIKADILIDPRSGVPLCLPYETCNGCEIVKELDSIAK
4MKI Chain:B ((30-245))
---------------------INFSIDDEEFVGIIGHTGSGKSTLIQQLNGLLKPSKGKIYINGIDITDKKVSLKDIRKQVGLVFQYPEYQLFEETVFKDIAFG--PSNLGLSEEEVKER--VYEAMEIVGISKELADKSPFELSGGQKRRVAIAGILAMRPKILILDEPTAGLDPKGKQEILNKIKEIHDKYKMITILVSHNMEDIARIADKIIVMNRGKIELIGTPREVFREAERLEKI--------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
4MKI.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -121328 for 1631 contacts (-74.4/contact) +
2D Compatibility (PS) -22888 + (NN) -10003 + (LL) 3932
1D Compatibility (HY) -16400 + (ID) 3400
Total energy: -170087.0 ( -104.28 by residue)
QMean score : 0.512
(partial model without unconserved sides chains):
PDB file :
Tito_4MKI.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4MKI-query.scw
PDB file :
Tito_Scwrl_4MKI.pdb
: