Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MGKTLFDKLWNRHVIYGKEGEPQLLYVDLHLIHEVTSPQAFEGLRLENRPLRRPDKTFATMDHNVPTEDIFNIQDLVAKKQIEALQTNCAEFGVTLADMGSDRQGIVHMVGPETGLTQPGKVIVCGDSHTATHGAFGAIGFGIGSSEVEHVFATQTIWQQK-PKSMGIEINGKLPKGVYAKDIILHLIATYGVAFGTGYAVEYYGETIRNMSMEERMTICNMAIEGGAKMGMMAPDETTFEYVRGREYAPTDMDKAISDWKT-LQTDSDAEYDLHIKMDASILEPYVTWGTNPEMGVPFSKAFPEIKDMNYERAYEYMGLKPGQTAEQ----IELGYVFIGSCTNARLSDLEEAARIVK---GNKVKNNIRALVVPGSRQVRNAAESIGLDKIFIEAGFEWREPGCSMCLGM-NPDQVPDGVH--CASTSNRNFEGRQGKGARTH--LVSPAMAAAAAINGHFIDIRKVAVISGGN |
| 1NIS Chain:A ((127-476)) | ------------------------------------------------------------------------------------LATAGAKYGVGFWRPGS---GIIHQIILEN-YAYPGVLLIGTDSHTPNGGGLGGICIGVGGADAVDVMAG-IPWELKCPKVIGVKLTGSLSGWTSPKDVILKVAGILTVKGGTGAIVEYHGPGVDSISCTGMATICNMGAEIGATTSVFPYNHRMKKYLSKTGRA--DIANLADEFKDHLVPDSGCHYDQLIEINLSELKPHINGPFTPDLAHPVAEV--------------------GSVAEKEGWPLDIRVGLIGSCTNSSYEDMGRSAAVAKQALAHGLKCKSQFTITPGSEQIRATIERDGYAQVLRDVGGIVLANACGPCIGQWDRKDIKKGEKNTIVTSYNRNFTGRNDANPETHAFVTSPEIVTALAIAG--------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1NIS.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -145236 for 2876 contacts (-50.5/contact) +
2D Compatibility (PS) -36681 + (NN) -14258 + (LL) 8172
1D Compatibility (HY) -16000 + (ID) 5300
Total energy: -209303.0 ( -72.78 by residue)
QMean score : 0.403
|
|
|