Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MFDWLTNSTAIIIILPVVVFILTMFFSSFKLKKSQRRIMLAADLSTIFLIIAVHFFMIVLFNRSFLLYILLFLFILGIVIV-VTAAKKEGEIQFRKILRGYWRLCFFIFALLYVALYLYGIVYSLVLMF
1WAZ Chain:A ((42-66))
----------------------------------------------------------------YLDYVLLPALAIFIGLTIYAIQRKR----------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
1WAZ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -11642 for 84 contacts (-138.6/contact) +
2D Compatibility (PS) -2454 + (NN) -716 + (LL) 12076
1D Compatibility (HY) -2000 + (ID) 300
Total energy: -5036.0 ( -59.95 by residue)
QMean score : 0.506
(partial model without unconserved sides chains):
PDB file :
Tito_1WAZ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1WAZ-query.scw
PDB file :
Tito_Scwrl_1WAZ.pdb
: