Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MGDKIAVIPGTFDPITNGHLDIIERAAKIFDVLYVSVLNNSSKKPLFTIEERMEMIRQVTAHLPNVQVESASGLTVDYAATRGATAIVRGLRAVSDFEYEMQIASMNRTLNADIETFFVMTNTKYSFLSSSMVKEVAQYQGDISELVPEIVNKAVQAKFK
4NAU Chain:A ((2-160))
-EHTIAVIPGSFDPITYGHLDIIERSTDRFDEIHVCVLKNSKKEGTFSLEERMDLIEQSVKHLPNVKVHQFSGLLVDYCEQVGAKTIIRGLRAVSDFEYELRLTSMNKKLNNEIETLYMMSSTNYSFISSSIVKEVAAYRADISEFVPPYVEKALKKKFK
General information:
TITO was launched using:
RESULT:
Template:
4NAU.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -99293 for 1195 contacts (-83.1/contact) +
2D Compatibility (PS) -17252 + (NN) -8393 + (LL) 208
1D Compatibility (HY) -19200 + (ID) 4750
Total energy: -148680.0 ( -124.42 by residue)
QMean score : 0.536
(partial model without unconserved sides chains):
PDB file :
Tito_4NAU.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4NAU-query.scw
PDB file :
Tito_Scwrl_4NAU.pdb
: