Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKKFLKVWSVLTIICMTVVVFGGALVTKTGSADGCGNSWPLCNGQLVRLTDVTPEKLIEFMHRMTTGISSIFVIVLAICAWIYMKNRRETKPLAIIAVLFLIIQALMGMAAVVWGQNPYIMALHFGISIICYASIVLLALMIFEVDRKFDARNLVMGTKLRVNIYALTIYTYLAVYTGALVRHEKASMAVPVWPFENGHFIMPTSVQDYVQYFHRLAAFILIVWLLYVTWLVFRDYR-R---------------------Y------RVLTFSMVLSLVFIALQAVTGALSVYTGV----N----LYIALAHSLIITMLFALLCYLCLLASRSKSNRLRIK |
| 1KQF Chain:C ((11-165)) | ------------------------------------------------------------------------------------------------------------------------------------------------------------KFIDRACHWTVVICFFLVALSGISFFFPTLQ-----WLT---Q---TFGTPQMGRILHPFFGIAIFVALMFMFVRFVHHNIPDKKDIPWLLNIVEVLKGNEHKVADVGKYNAGQKMMFWSIMSMIFVLLVTGVIIWRPYFAQYFPMQVVRYSLLIHAAAGIILIHA------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1KQF.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -105249 for 789 contacts (-133.4/contact) +
2D Compatibility (PS) -12685 + (NN) -9038 + (LL) 17876
1D Compatibility (HY) -6400 + (ID) 800
Total energy: -116296.0 ( -147.40 by residue)
QMean score : 0.257
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