Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
LDKTKRKMIYETFMLILILLSLALLPYRNNFTFILNWIIWVIFTLDYLVRLYRADNKWHYVKTHPFQLIAIIPFYGGFRAARIVSFV--HLLSIT-----------------AMGRRYIVPI---------YSFFRSNGLNRFLMIFVLLVIIIPVPMVFIEPEINNYPDALWWAIVTATTVGYGDIVPVTPIGRILASIMMLFGIAFIGMITSTITNFFRAKKPTNSSTQRANKITQLISETPDLTKEEIAVVEQFLTLRKKELADENTKSDSE
1ORQ Chain:C ((42-219))
--------------------------------YLVDLILVIILWADYAYRAYKSGDPAGYVKKTLYEIPALVP-------AGLLALIEGHLAGLGLFRLVRLLRFLRILLIISRGSKFLSAIADAADKIRFYHLFGAVMLTVLYGAFAIYIVEYPDP----NSSIKSVFDALWWAVVTATTVGYGDVVPATPIGKVIGIAVMLTGISALTLLIGTVSNMFQ------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
1ORQ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -116513 for 926 contacts (-125.8/contact) +
2D Compatibility (PS) -15280 + (NN) -3315 + (LL) 8064
1D Compatibility (HY) -18800 + (ID) 2600
Total energy: -148444.0 ( -160.31 by residue)
QMean score : 0.030
(partial model without unconserved sides chains):
PDB file :
Tito_1ORQ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1ORQ-query.scw
PDB file :
Tito_Scwrl_1ORQ.pdb
: