Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MMEETTKIPQATAKRLPLYHRYLKYLDESGKERVSSAELSEAVKVDSATIRRDFSYFGALGKKGYGYNVSYILDFFSKTLSQDKQTNVALIGVGNLGTALLHYNFMKNNNIKIVAAFDVDPAK-VGSVQQD-IPIYHLNDMEEIVRENGVEVVILTVPADEAQVTVDRLIEADVKGILNFTPARISVPKQVRVHHIDLTTELQTLIYFLENYPAKTE
3KEQ Chain:A ((7-208))
-------IPKATAKRLSLYYRIFKRFNTDGIEKASSKQIADALGIDSATVRRDFSYFGE-------YDVKKLMNFFAEILN---TTNVMLVGCGNIGRALLHYRFHDRNKMQISMAFDLDSNDLVGKTTEDGIPVYGISTINDHLIDSDIETAILTVPSTEAQEVADILVKAGIKGILSFSPVHLTLPKDIIVQYVDLTSELQTLLYFM--------
General information:
TITO was launched using:
RESULT:
Template:
3KEQ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -143067 for 1326 contacts (-107.9/contact) +
2D Compatibility (PS) -20510 + (NN) -5251 + (LL) 1120
1D Compatibility (HY) -20800 + (ID) 4550
Total energy: -193058.0 ( -145.59 by residue)
QMean score : 0.572
(partial model without unconserved sides chains):
PDB file :
Tito_3KEQ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3KEQ-query.scw
PDB file :
Tito_Scwrl_3KEQ.pdb
: