Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKKIPFIIQYVKSTLGPTAIFEGRKVLKFWQMVIVFIFLNALLLLPVSAHFANQSSFDLPSLMPKMATLGTDQLASKISGLTLENGALTDKNAHIVEKTVNGVAGVNLTKAELSGAKNVINFKDQEMTLTDASGYNFEVSYPKDATLSEITSGESLVDWVSAQWYLENQAFVFLSMVLMIGSII---FVSSLMLTVFTTLFIW--MTKRSSFSSIASFKESVNLTLNALGIPVIAACIIGFIYFDITIIMAVQSLGMVLMIAWTFLKTRFYKTSEKSMAASR |
1H1L Chain:A ((374-466)) | -----------------------------------------------------------------------------------------------------------------------------------AAGYEFAHNDDYDRTLPDLKEGTLLFDDASS---YELEAFVKALKPDLIGSGIKEKYIFQKMGVPFRQMHSWDYSGPYHGYDGFAIFARDMDMTLN------------------------------------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1H1L.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -26146 for 487 contacts (-53.7/contact) +
2D Compatibility (PS) -8910 + (NN) 2384 + (LL) 16180
1D Compatibility (HY) -3200 + (ID) 1350
Total energy: -21042.0 ( -43.21 by residue)
QMean score : 0.072
|
|
|