Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMLVNMKQLLEVAKENKFAVGAFNVADSNFLRVVVEEAEKNNAPAIIAVHP-TELDFTKDDFFQYVLARIKNSPVPFVLHLDHGDNMGDVMRAVRCGFSSVMIDGSLLPFEENIRVTKEVVDVCHKLGVSVEGELGTIGKTGNSIEGGVSEIIYTKPEEAEEYISRTGVDTLAVAIGTAHGIYPKDKEPKLRLDILKEIKALVNIPLVLHGGSANPDAEIAAAVEIGIQKVNISSDYKYAFYKKCREILSTTELWDANAIYPDC-IDAAKEVVKYKMGLFESIGQVEKYQQAKTTAWRSELI
1GVF Chain:A ((3-284))-IISTKYLLQDAQANGYAVPAFNIHNAETIQAILEVCSEMRSPVILAGTPGTFKHIALEEIYALCSAYSTTYNMPLALHLDHHESLDDIRRKVHAGVRSAMIDGSHFPFAENVKLVKSVVDFCHSQDCSVEAELGRLG-----------SAFLTDPQEAKRFVELTGVDSLAVAIGTAHGLY--SKTPKIDFQRLAEIREVVDVPLVLHGASDVPDEFVRRTIELGVTKVNVATELKIAFAGAVKAWFAENPQGNDPRYYMRVGMDAMKEVVRNKINVCGSANRI----------------


General information:
TITO was launched using:
RESULT:

Template: 1GVF.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -166319 for 2334 contacts (-71.3/contact) +
2D Compatibility (PS) -29517 + (NN) -10482 + (LL) 1764
1D Compatibility (HY) -24400 + (ID) 5100
Total energy: -234054.0 ( -100.28 by residue)
QMean score : 0.589

(partial model without unconserved sides chains):
PDB file : Tito_1GVF.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1GVF-query.scw
PDB file : Tito_Scwrl_1GVF.pdb: