Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNIIGIAACTSGIAHTYIAKEKLTKAGLALGHNVHIETQGTIGIEDELSAEQVKNADVVIIAADIKISGKDRFKGKRVVEIPTDLAIKAPKQIINKIDKEINN
2R4Q Chain:A ((172-264))
--ILAVTACPTG--HTFMAADALKEKAKELGVEIKVETNGSSGIKHKLTAQEIEDAPAIIVAADKQVE-MERFKGKRVLQVPVTAGIRRPQELIEK-------
General information:
TITO was launched using:
RESULT:
Template:
2R4Q.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -33597 for 685 contacts (-49.0/contact) +
2D Compatibility (PS) -9607 + (NN) -3415 + (LL) 788
1D Compatibility (HY) -3600 + (ID) 1200
Total energy: -50631.0 ( -73.91 by residue)
QMean score : 0.462
(partial model without unconserved sides chains):
PDB file :
Tito_2R4Q.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2R4Q-query.scw
PDB file :
Tito_Scwrl_2R4Q.pdb
: