Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKKVFITTGTEHYLRQLMANYTGGNVTLLQNFSQSLLYQESTGEKLFQEGAEYRVLQSSGSIKGFGVVVFEYIHLRDEEIPIFLQMYQRASLHFSETPGLQSTKLTKAMNMNKFLIISFWDSEVFFHDWKKSPLSKEITNIMRKNNTQSGFSHEDIYHYPEFSHDAK
4OZ5 Chain:A ((2-136))
--KVYITYGTADFLKTIVKKHPSENILLMQGQENAILIHETSGDTVFQAPHAYEVIDQVGEIKHPGFAVLNNIAVTQEGRPLFENKFKNRAGKVENEPGFEAIRVLRPLDSDTYVILTLWETERAFQDWQQSDSYKE------------------------------
General information:
TITO was launched using:
RESULT:
Template:
4OZ5.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -62017 for 953 contacts (-65.1/contact) +
2D Compatibility (PS) -14557 + (NN) -6391 + (LL) 1688
1D Compatibility (HY) -10400 + (ID) 1850
Total energy: -93527.0 ( -98.14 by residue)
QMean score : 0.374
(partial model without unconserved sides chains):
PDB file :
Tito_4OZ5.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4OZ5-query.scw
PDB file :
Tito_Scwrl_4OZ5.pdb
: