Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MFTINTKSQLPIYEQIVQKIKEQVVKGVLQEGEKILSIREFASRIGVNPNTVSKAYQELERQEVIITVKGKGTFIANQTDKLSSPKKLAETRTKLKETILDLVYLGVNIEEIHKLADEYSQDIIGGDVVEG
3NEU Chain:A ((13-77))
----------PIYSQISDWMKKQMITGEWKGEDKLPSVREMGVKLAVNPNTVSRAYQELERAGYIYAKRGMGSFV--------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
3NEU.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -40285 for 424 contacts (-95.0/contact) +
2D Compatibility (PS) -6797 + (NN) 980 + (LL) 4684
1D Compatibility (HY) -6400 + (ID) 1500
Total energy: -49318.0 ( -116.32 by residue)
QMean score : 0.809
(partial model without unconserved sides chains):
PDB file :
Tito_3NEU.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3NEU-query.scw
PDB file :
Tito_Scwrl_3NEU.pdb
: