Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNNIKQAIIKLETILENGNAIESGSFVKYSVIKNILS----LLEK-DQELKIIEMKVELNGVEDSIENATLLEKRLIEAKSLVEDLASTINSLEIKVK
2BBJ Chain:A ((168-242))
-------------------------YLLYSLIDALVDDYFVLLEKIDDEIDVLEEEVLERPEKETVQRTHQLKRNLVELRKTIWPLREVLSSL-----
General information:
TITO was launched using:
RESULT:
Template:
2BBJ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -3642 for 272 contacts (-13.4/contact) +
2D Compatibility (PS) -6869 + (NN) -5146 + (LL) 2388
1D Compatibility (HY) -6400 + (ID) 850
Total energy: -20519.0 ( -75.44 by residue)
QMean score : 0.526
(partial model without unconserved sides chains):
PDB file :
Tito_2BBJ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2BBJ-query.scw
PDB file :
Tito_Scwrl_2BBJ.pdb
: