Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTSRKLDQLYRQVIMDHYKNPRNNGELPDSDVTIDLNNPTCGDQIHLHLKMDGDKIVAAKFTGSGCSISMASASMMTQSIIGKTEKEALKMSREFSEMVQGHDHETIDEYGDVEALAGVAKFPARIKCATLSWKAMERAI---FEKEGTK
4EB7 Chain:C ((2-122))
---------YSDKVFDHFQNPRNVGKIEDADGVGTV---VCGDLMTIYIKVKDNRIEDIKFQTFGCAAAIATSSMATEMAKGKTIEEALKITRDAV----------------AEALGGLPK--QKMHCSNLAADALRRAIVDYFRKNG--
General information:
TITO was launched using:
RESULT:
Template:
4EB7.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -62532 for 945 contacts (-66.2/contact) +
2D Compatibility (PS) -12355 + (NN) -4543 + (LL) 1296
1D Compatibility (HY) -6000 + (ID) 2250
Total energy: -86384.0 ( -91.41 by residue)
QMean score : 0.556
(partial model without unconserved sides chains):
PDB file :
Tito_4EB7.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4EB7-query.scw
PDB file :
Tito_Scwrl_4EB7.pdb
: