Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | LLIWSILISFAVGIIMVPIIRKFAFRINAVDTPRERHKHTKTTATLGGLAIFISFSVGMILAPIDKSGFLPIYFGALIIIATGFIDDIFDLSPKWKMLGQILAALCVTVWGDITINFINVPFYGQVDFGYFAIPLSIIWIVAIVNALNLIDGLDGLAGGISIIALMTIAGMAL--LLKDVFVAPVALILVAAVAAFLIYNFPPASIF--MGDTGALFLGYMIAVLSLMGFKNVTFISLLVPL-IILGVPLSDTFFAIVRRLKERMPISSADRSHIHHRLMALGFTEKQTVLLIYCMALLFSMTGFVFSFSTTWGAMLLLLLLIFSIEIIVEFIGLIGEDYRPILNLLQKIHRKRK |
3T8J Chain:A ((102-210)) | -------------------------------------------------------------------------------------------------------------------------------------------------ALAIIDLANEYAGELEFLAISPLTNLALAYLLDNSIVKKIKKVWVMGGAVFGIGNITPVAEFNIWVDPDAAKIVF-----------NAGFDITMIPWDVIINYPVTDEEWNVIKNMKTRM------------------------------------------------------------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 3T8J.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -113773 for 632 contacts (-180.0/contact) +
2D Compatibility (PS) -10251 + (NN) 519 + (LL) 22400
1D Compatibility (HY) -10400 + (ID) 1500
Total energy: -113005.0 ( -178.81 by residue)
QMean score : 0.062
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