Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MQTIHWNINKQQSNQAIFQEAAKLLQGGECVAFPTETVYGLGADATNQAAVQKIYEAKGRPSDNPLIVHIARREQMDQFVASYPA-KAIQLMEKFWPGPLTVILPLKKDSLATNV-SAGLSTVGVRMPEHPVSLALIGTANIPIAAPSANRSGKPSPTTASHVIEDLDGKIAGIIDGGATGVGLESTVIDCSLEIPIILRPGGVTKEQIEQIIGPVDISTNNTKETEKPKAPGMKYTHYAPKAPVYLIEGSTQFWQSEINKAEAANKKLGILATKELINQLNTSGTIETTGSIKALDEIATSLYKGLRAFDHADVDIIFAEVYPETELGAAIMNRLEKAAGNRRITE |
| 1JCU Chain:A ((6-193)) | -------ITRKNPSPDVLEEAISVMEGGGIVIYPTDTIYGLGVNALDEDAVRRLFRVKGRSPHKPVSICVSCVDEIPRF--SRPSGDAMELMERILPGPYTVV--LERNELIPDVITGGSSRVGIRVPDDEICRRI--AARFPVTATSANISGKPPSPRLEEIVRDLDA-VDLVLDAGDCLDMEPSTVIDLTVNPPRVLRRG------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1JCU.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -66543 for 1367 contacts (-48.7/contact) +
2D Compatibility (PS) -20863 + (NN) -13971 + (LL) 11144
1D Compatibility (HY) -16400 + (ID) 3250
Total energy: -109883.0 ( -80.38 by residue)
QMean score : 0.394
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