Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAQLFFRYGSMNSGKTIEILKVAHNYEEQNKTVAIFTSGIDDRDQVGFISSRIGLKREATPIFSDTNIFEIVVNIKPKPNCVLLDESQFLEKEHVFQLAKIVDELNIPVIAYGLKNDFRNELFEGSKYLLLYADKLEEMKTICWFCAK-KATMVLRVDDKGKPVYTGEQIMIGGNDHYYPVCRKCHANPPIK
2ORW Chain:A ((10-177))
--------GPMYSGKTTELLSFVEIYKLGKKKVAVFKPK-----HSTMIVS----GVEAHVIERPE---EMRKYIEEDTRGVFIDEVQFFNPS-LFEVVKDLLDRGIDVFCAGLDLTHKQNPFETTALLLSLADTVIKKKAVCHRCGEYNATLTLKVAG------GEEEIDVGGQEKYIAVCRDCY------
General information:
TITO was launched using:
RESULT:
Template:
2ORW.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -75983 for 1168 contacts (-65.1/contact) +
2D Compatibility (PS) -17075 + (NN) -5759 + (LL) 1940
1D Compatibility (HY) -11200 + (ID) 2650
Total energy: -110727.0 ( -94.80 by residue)
QMean score : 0.376
(partial model without unconserved sides chains):
PDB file :
Tito_2ORW.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2ORW-query.scw
PDB file :
Tito_Scwrl_2ORW.pdb
: