Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRTTYMAKPGEVERKWYVIDATGVSLGRLSSEVASILRGKNKPQFTPHIDTGDFVIIINAGKIGLTGKKATDKIYYRHSQYPGGLKSRTAGEMRTNNPEKLLELSIKGMLPKNSLGRQLFKKLHVYGGSEHEHAAQQPEVYELRG
3BBX Chain:J ((3-140))
---TFTAKPETVKRDWYVVDATGKTLGRLATELARRLRGKHKAEYTPHVDTGDYIIVLNADKVAVTGNKRTDKVYYHHTGHIGGIKQATFEEMIARRPERVIEIAVKGMLPKGPLGRAMFRKLKVYAGNEHNHAAQQPQVL----
General information:
TITO was launched using:
RESULT:
Template:
3BBX.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -21967 for 916 contacts (-24.0/contact) +
2D Compatibility (PS) -14472 + (NN) -5953 + (LL) 568
1D Compatibility (HY) -13600 + (ID) 3850
Total energy: -59274.0 ( -64.71 by residue)
QMean score : 0.338
(partial model without unconserved sides chains):
PDB file :
Tito_3BBX.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3BBX-query.scw
PDB file :
Tito_Scwrl_3BBX.pdb
: