Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MPKLSLLKQDGTNAGEITLNDTVFGIEPNEKVVVDVILSQRASLRQGTHKVKNRSEVRGGGRKPWRQKGTGRARQGSIRSPQWRGGGVVFGPTPRSYAYKLPKKVRRLAIKSILSSKVNEEKLVVLEGLTFDAPKTKEFAAFLKNISVDTKALIVVAGE-SENVELSARNLQGITVIPAESISVLEVAKHDKLIITKAAVEKVEEVLA |
2RDO Chain:E ((1-201)) | ---MELVLKDAQSA--LTVSETTFGRDFNEALVHQVVVAYAAGARQGTRAQKTRAEVTGSGKKPWRQKGTGRARSGSIKSPIWRSGGVTFAARPQDHSQKVNKKMYRGALKSILSELVRQDRLIVVEKFSVEAPKTKLLAQKLKDMALED--VLIITGELDENLFLAARNLHKVDVRDATGIDPVSLIAFDKVVMTADAVKQVEEMLA |
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General information:
TITO was launched using:
| RESULT:
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Template: 2RDO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 1988218 for 17391 contacts (114.3/contact) +
2D Compatibility (PS) -18646 + (NN) -815 + (LL) 272
1D Compatibility (HY) 3200 + (ID) 950
Total energy: 1971279.0 ( 113.35 by residue)
QMean score : ?
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