Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MDSAYVFDSEQATKLLMKNYELVKTSGVSFIDKRIRFLIARLFAGNNEVVNPERFNEINKEIKRQLGMFTALNGNVRASLVGLLMANNNASRESVQQVIANYNTLIQAGFQRTEYTYFAAYLLLESENPTKTAQKAKTIHQLFKKDHPFLTKSEDVTTAVFLANLPEENTTELAEVTEYYFQEFAAKGFRKNDSLQFLATTGTLLYGEKDSKFIRRVDNIVEELRQKGIKVKPIHYSSIGILAFVMDGRKIDSGLVNLIDELQQQPGLRFGREFVTALAISLYTEKQSGQMSKEQLEGLMVNVHILIAMEQAAAVSAAAAASAAAASS |
| 2VH3 Chain:A ((26-56)) | ---------------------------------------------------------------------------------------------------------KHQGFKKKSYALICAYLNYKEDA--ENYERAAEDFD------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2VH3.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 12622 for 155 contacts (81.4/contact) +
2D Compatibility (PS) -3137 + (NN) 1811 + (LL) 23488
1D Compatibility (HY) 1200 + (ID) 100
Total energy: 35884.0 ( 231.51 by residue)
QMean score : -0.207
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