Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MAKPYGVVIISHSKDVAKGVHDIIKEIAPDVSITHAGGTEDGRIGTSFDAVNEAIENNEANKV--YTFYDLGSAKMNIETVEEISEKEIILFNAPILEGAYATAAQVQMDEKPEVIAANLKTIEIK |
3C9F Chain:A ((209-303)) | ---------ISHNWGEFYQVHQYLRQFFPDTIIQYFGGHSHIRDFTVFDSLSTGLQSGRYCETVGWTSVNLDKADLNLPVRQRFSRSYI------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3C9F.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 11157 for 466 contacts (23.9/contact) +
2D Compatibility (PS) -7923 + (NN) 114 + (LL) 4420
1D Compatibility (HY) -4000 + (ID) 1000
Total energy: 2768.0 ( 5.94 by residue)
QMean score : 0.276
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