Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MESRSNKFGRKKNKKIGKLHKSYDAYLMELIEVTQENWHK--QKVLMRKS---FEYDPNLEYEEKKAEARYFYLFKEARTRQLKNK
4Q6P Chain:A ((285-345))
LRPKLNHFPLPHNTKIPQIPIESNAYIVGLVKNKQEVFLKYGNKLMTRLSPFYIEFDPSLE-------------------------
General information:
TITO was launched using:
RESULT:
Template:
4Q6P.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 8635 for 249 contacts (34.7/contact) +
2D Compatibility (PS) -5432 + (NN) 3915 + (LL) 2452
1D Compatibility (HY) -4800 + (ID) 950
Total energy: 3820.0 ( 15.34 by residue)
QMean score : 0.221
(partial model without unconserved sides chains):
PDB file :
Tito_4Q6P.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4Q6P-query.scw
PDB file :
Tito_Scwrl_4Q6P.pdb
: