Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRFFIDTANVEEIKKANRMGFISGVTTNPSLVAKE---GRDFNEVIQEITSIVDGPISGEVVSLEADEMIAEGRVIAKIHPNMVVKIPMTGEGLAAVKVLTEEGIKTNVTLVFSATQALLAARAGATYVSPFLGRLDDIGDDGLVLIRDIADIFEIHGIPTEIISASVRHPIHVIECAKAGADIATVPFKVFEQMLKHPLTDSGIDKFLADWEAAKK
3S0C Chain:A ((1-213))
MKIFLDTANIDEIRTGVNWGIVDGVTTNPTLISKEAVNGKKYGDIIREILKIVDGPVSVEVVSTKYEGMVEEARKIHGLGDNAVVKIPMTEDGLRAIKTLSSEHINTNCTLVFNPIQALLAAKAGVTYVSPFVGRLDDIGEDGMQIIDMIRTIFNNYIIKTQILVASIRNPIHVLRSAVIGADVVTVPFNVLKSLMKHPKTDEGLAKFLEDWK----
General information:
TITO was launched using:
RESULT:
Template:
3S0C.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -132824 for 1721 contacts (-77.2/contact) +
2D Compatibility (PS) -22942 + (NN) -5575 + (LL) 416
1D Compatibility (HY) -24400 + (ID) 5700
Total energy: -191025.0 ( -111.00 by residue)
QMean score : 0.565
(partial model without unconserved sides chains):
PDB file :
Tito_3S0C.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3S0C-query.scw
PDB file :
Tito_Scwrl_3S0C.pdb
: