Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MLFLKELESNLTVSKLMELCFEHPNYKDYCSVISTKKGEVLESLSPAGTKVYFVLSGIYGMIVEEDAEMEEESCKECIVRFLQKGDSFGLYHLFYDEWSPHVSMQSLGHGEVMEVDSNFLFS-IFDKKDENNFFMIKVMAEELREAHTFAKLSFLKKEERIRKAILKCAQTLGTFSDNGILLPREITQEVLARYTNTSREYVAHTVMHLIKEDIIRNRPKPLLVMDKTRL
3D0S Chain:A ((47-222))
-----------------------------------------------GDRLYIIISGKVKI------GRRAPDGRENLLTIMGPSDMFGELSIF-DPGPRTSSATTITEVRAVSMDRDALRSWIADRPEISEQLLRVLARRLRRTNNNLADLIFTDVPGRVAKQLLQLAQRFGTQEGGALRVTHDLTQEEIAQLVGASRETVNKALADFAHRGWIRLEGKSVLISDSERL
General information:
TITO was launched using:
RESULT:
Template:
3D0S.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -78948 for 1204 contacts (-65.6/contact) +
2D Compatibility (PS) -18989 + (NN) -9269 + (LL) 4308
1D Compatibility (HY) -8400 + (ID) 2100
Total energy: -113398.0 ( -94.18 by residue)
QMean score : 0.308
(partial model without unconserved sides chains):
PDB file :
Tito_3D0S.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3D0S-query.scw
PDB file :
Tito_Scwrl_3D0S.pdb
: