Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKIAAFDIGGTALKMGVVLPHGEI---------ILTKSAEISGSDGDQILAEMKVFLAENTDVTGIAVSAPGYVNPKTGLITMGGAIRRFDNFNLKEWLEAETGLPVAIENDANCALLAEKWLGKGQDLDDFLCLTIGTGIGGGIFSNGELVRGGRFRAGEFGYMFSERPGAF--RPGKYTLNETTT-----MLVLRRQYAELTGRPL--------EEITGEEIFANYDAHDAVSERLITE--FYTGICTGLYNLIYLFDPTHIFIGGGITSRPTFI-AELKHHMESFGL----RDTIIETATHKNQAGLLGAVYHFLQEENRHE |
| 2QM1 Chain:A ((7-321)) | -KIIGIDLGGTTIKFAILTTDGVVQQKWSIETNILEDGKHIVPSIIESIRHRIDLYNMKKEDFVGIGMGTPGSVDIEKGTVVGAYNLNWTTVQPVKEQIESALGIPFALDNDANVAALGERWKGAGENNPDVIFITLGTGVGGGIVAAGKLLHGVAGCAGEVGHVTVD-PNGFDCTCGKRGCLETVSSATGVVRVARHLSEEFAGDSELKQAIDDGQDVSSKDVFEFAEKGDHFALMVVDRVCFYLGLATG--NLGNTLNPDSVVIGGGVSAAGEFLRSRVEKYFQEFTFPQVRNSTKIKLAELGNEAGVIGAASLALQ------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 2QM1.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -147396 for 2356 contacts (-62.6/contact) +
2D Compatibility (PS) -30260 + (NN) -16470 + (LL) 952
1D Compatibility (HY) -16800 + (ID) 4400
Total energy: -214374.0 ( -90.99 by residue)
QMean score : 0.405
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