Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKIRNLTKKMDDNLVLKDVSFDLKAGEITALIGRNGVGKTTLFSTMTGIYLPDEGD--VFLDEESIFK-HPEVKQQLFFLEDNMNHFNTYSV----QTVVKIYRQIYTTFDEAFFNELMQQFELPMKAKLM--SFSKGRKALFFIILAFSLNVRFLLLDEPLDGLD---IIIKKQILATIKDTVKKRGTSVVIASHRLEELEAIADRV-IVLKGASVELDYYLEDMRTDAVKIQVAFKTKKIPGFVKNNAQLLYRNGRIYTLLVTENASSFLAELRLEEPVLLEEMSISIEDIFTVHLANDKIDYYEI |
| 4QC2 Chain:A ((7-213)) | ---KNLAKAYKGRRVVEDVSLTVNSGEIVGLLGPNGAGKTTTFYMVVGIVPRDAGNIIIDDDDISLLPLHARARRGIGYLPQEASIFRRLSVYDNLMAVLQIRDDLSAEQREDRANELMEEFHIEHLRDSMGQSLSGGERRRVEIARALAANPKFILLDEPFAGVDPISVIDIKRIIEHLRDS----GLGVLITDHNVRETLAVCERAYIVSQG---------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4QC2.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -121210 for 1411 contacts (-85.9/contact) +
2D Compatibility (PS) -20686 + (NN) -3706 + (LL) 9236
1D Compatibility (HY) -11200 + (ID) 3350
Total energy: -150916.0 ( -106.96 by residue)
QMean score : 0.442
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