Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MTLYIIANPHAGNKNASTIVGKIQELYHTEDISVFYTEQKDDEKKQVINILRSFKESDHLMIIGGDGTLSKVMTYLPQ----HIPC-AYYPVGSGNDFARALKIPN-LKETLT--------AIQTERLKEINCFIYDKGLILNSLDLGFAAYVVWKASNSKIKNILNRYRLGKITYIVIAI--KSLLHSSKVQVLVEGETGQQIKLNDLYFFALANNTYFGGGITIWPKASALTAELDMVYAKGHTFLKRLSILLSLVFKRHTTSKSIKHQTFKAMTVYFPKNSLIEIDGEI-------VELDQISLKCQKRYLYM |
2JGR Chain:A ((65-290)) | ---------------------------------------------------------------GGDGTINEVSTALIQCEGDDIPALGILPLGTANDFATSVGIPEALDKALKLAIAGDAIAIDMAQVNKQTCFI-------NMATGGFGT--------------------------IHGLMRMDTLQPDRCEIRGENFHWQ----GDALVIGIGNGRQAGGGQQLCPNALINDGLLQLRIFTG-------------------DNPNIIEGASSWFDIQAPHDITFNLDGEPLSGQNFHIEILPAALRCRLPPDCP |
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General information:
TITO was launched using:
| RESULT:
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Template: 2JGR.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -70431 for 1297 contacts (-54.3/contact) +
2D Compatibility (PS) -17714 + (NN) 2576 + (LL) 10188
1D Compatibility (HY) -7600 + (ID) 2450
Total energy: -85431.0 ( -65.87 by residue)
QMean score : 0.311
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