Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMALTAGIVGLPNVGKSTLFNAITKAG-AEAANYPFATIDPNVGMVEVPDERLQKLTELITPKKTVPTTFEFTDIAGIVKGASKGEGLGNKFLANIREVDAIVHVVRAFDDENVMREQGREDAFVDPIADIDTINLELILADLESINKRYARVEKM----ARTQKDKESVAEFNVLQKIKPVLEDGKSA-RTIEFTEEEAKVVKGLFLLTTKPVLYVANVDEDKVADPDDIDYVNQIRAFAETENAE---VVVISARAEEEISELDDEDKLEFLEAIGLTESGVDKLTRAAYHLLGLGTYFTAGEKEVRAWTFKRGIKAPQAASIIHSDFERGFIRAVTMSYDDLIQYGSEKAVKEAGRLREEGKEYIVQDGDIMEFRFNV
1NI3 Chain:A ((21-388))--LKTGIVGMPNVGKSTFFRAITKSVLGNPANYPYATIDPEEAKVAVPDERFDWLCEAYKPKSRVPAFLTVFDIAGLTKGASTGVGLGNAFLSHVRAVDAIYQVVRAFDDAEIIHVEGD----VDPIRDLSIIVDELLIKDAEFVEKHLEGLRKITSRGANTLEMKAKKEEQAIIEKVYQYLTETKQPIRKGDWSNREVEIINSLYLLTAKPVIYLVNMSERDFLRQKN-KYLPKIKKWID-ENSPGDTLIPMSVAFEERLTNFTEEEAIEECKKLN-TKSMLPKIIVTGYNALNLINYFTCGEDEVRSWTIRKGTKAPQAAGVIHTDFEKAFVVGEIMHYQDLFDYKTENACRAAGKYLTKGKEYVMESGDIAHWK---


General information:
TITO was launched using:
RESULT:

Template: 1NI3.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -136579 for 2775 contacts (-49.2/contact) +
2D Compatibility (PS) -39203 + (NN) -12710 + (LL) 1332
1D Compatibility (HY) -34400 + (ID) 7550
Total energy: -229110.0 ( -82.56 by residue)
QMean score : 0.507

(partial model without unconserved sides chains):
PDB file : Tito_1NI3.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1NI3-query.scw
PDB file : Tito_Scwrl_1NI3.pdb: