Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MRVSQTYGLVLYNRNYREDDKLVKIFTETEGKRMFFVKHASKSKFNAVLQPLTIAHFILKINDNGLSYIDDYKEVLAFQETNSDLFKLSYASYITSLADVAISDNVADAQLFIFLKKTLELIEDGLDYEILTNIFEVQLLERFGVALNFHDCVFCHRVGLPFDFSHKYSGLLCPNHYYKDERRNHLDPNMLYLINRFQSIQFDDLQTISVKPEMKLKIRQFLDMIYDEYVGIHLKSKKFIDDLSSWGSIMKSD |
2L89 Chain:A ((50-120)) | --------------------------------------------------------------------------------------------------------------------------------------------------LNFGDRILVKAPGYPW-----WPALLLRRKETKDSLNTNSSFNVLYKVLFFPDFNFAWVKRNSVKPLLDSEIAKFLGSSKRKSKELIEAYEASKTPPDLKEESSTDL |
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General information:
TITO was launched using:
| RESULT:
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Template: 2L89.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -33420 for 410 contacts (-81.5/contact) +
2D Compatibility (PS) -7097 + (NN) 4210 + (LL) 12308
1D Compatibility (HY) -6400 + (ID) 1100
Total energy: -31499.0 ( -76.83 by residue)
QMean score : 0.195
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