Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MTYEVKSLNEECGVFGIWGHPQAAQVTYFGLHSLQHRGQEGAGIVSNDNGKLYGYRNV-GLLSEVFKNQSELDNLTGNAAIGHVRYATAGSADIRNIQPFLYKFHDGQFALCHNGNLTNAISLRKEL-EKQGAIFNASSDTEILMHLIRRS-----HNPSFMGKVKEALST----VKGGFAYLLMT-EDKLIAALDPNAFRPLSIGQM----QNGAWVISSETCAFEVVGAKWVRDVEPGEVILIDDSGIQCDRYTDETQLA-ICSMEYVYFARPDSTIHGVNVHTARKNMGKRLAQEFKQ-----DADIVIGVPNSSLSAAMGFAEESGLPNEMGLVKNQYTQRTFIQPTQELREQGVRMKLSAVSGVVKGKRVVMIDDSIVRGTTSRRIVGLLREAGASEVHVAIASPELKYPCFYGIDIQTRRELISANHAADEVCDIIGADSLTYLSLDGLIESIGLETKAPNGGLCVAYFDGHYPTPLYDYEEEYLRSLEEKTSFYIQKVK |
1ECC Chain:A ((1-479)) | -----------CGIVGIAGVMPVNQSIYDALTVLQHRGQDAAGIITIDANNCFRLRKANGLVSDVFEAR-HMQRLQGNMGIGHVRYPTAGSSSASEAQPFYVNSPYG-ITLAHNGNLTNAHELRKKLFEEKRRHINTTSDSEILLNIFASELDNFRHYPLEADNIFAAIAATNRLIRGAYACVAMIIGHGMVAFRDPNGIRPLVLGKRDIDENRTEYMVASESVALDTLGFDFLRDVAPGEAIYITEEGQLFTRQCADNPVSNPCLFEYVYFARPDSFIDKISVYSARVNMGTKLGEKIAREWEDLDIDVVIPIPETSCDIALEIARILGKPYRQGFVKNRYVGRTFIMPGQQLRRKSVRRKLNANRAEFRDKNVLLVDDSIVRGTTSEQIIEMAREAGAKKVYLASAAPEIRFPNVYGIDMPSATELIAHGREVDEIRQIIGADGLIFQDLNDLIDAVRAENPDIQQFEC-SVFNGVYVTK--DVDQGYLDFLDTLRNDDAKAVQ |
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General information:
TITO was launched using:
| RESULT:
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Template: 1ECC.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -272579 for 4359 contacts (-62.5/contact) +
2D Compatibility (PS) -48784 + (NN) -17620 + (LL) 1540
1D Compatibility (HY) -37200 + (ID) 9400
Total energy: -384043.0 ( -88.10 by residue)
QMean score : 0.506
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