Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMTIYDQIESALDLMTDLEREIACYFMGQPISKDALASTIVTKQLHISQAALTRFAKKCGFKGYREFVFEYLKSHETISQQLYGLQNDNTKKVFMNYQEMVSKSADIIDEEQLLEVSHMIEQADRVYFYGKGSSSLVAKEFKIRLMRLG----VICEALDDTDSFSWTNSIVNDRCLVIAFSLSGNTNSVI-GALKIASSHGAKTVLFTKQPHTIDYAFDKIIQVASARHLDYGNRISPQIPMLIMVDIIYAQFLDINKIEKERIFRETIIQR
1VIV Chain:A ((17-132))------------------------------------------------------------------------------------------------------SAAYISNEEADQLADHILSSHQIFTAGAGRSGLMAKSFAMRLMHMGFNAHIVGEILTPP---------LAEGDLVIIGSGSGETKSLIHTAAKAKSLHGIVAALTINPESSIGKQADLIIRMPGSPKDQSNGSYKTIQPMGSLFEQTLLLFYDAVILKLMEKKGLDSETM


General information:
TITO was launched using:
RESULT:

Template: 1VIV.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -70494 for 830 contacts (-84.9/contact) +
2D Compatibility (PS) -11967 + (NN) -5215 + (LL) 8960
1D Compatibility (HY) -4800 + (ID) 1850
Total energy: -85366.0 ( -102.85 by residue)
QMean score : 0.377

(partial model without unconserved sides chains):
PDB file : Tito_1VIV.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1VIV-query.scw
PDB file : Tito_Scwrl_1VIV.pdb: