Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MASGEKAKIQRKKSGAWSMTYKTLDGNVVATFRPMFKKTGSHCYISTSKMTKSDGNNNFSIQIYYKGTSNVKIKMFDDNPEHTMQFSKKKFANNMLNRDESTTNHSYDKVLEGDLTPFMGQFSSDSFNQTIVDSGMTYGGYEPKDYYEGRTTVFPAITKTGYWNGITSHGSYVIKNDDLPKKIKNYYEIHVYGANSGAINSTGSLKRIFYLVPPKVEGPDGKVLSKRQVFEVGANNQLISLSYQSPDWWKRYKKSGLEKDLDVDAIYRGDFSSLKGTWRNGKGEVLTINDDGSTDDGERISIGSTEKSRLPSV---GMSSGNFGVSVYLFQIGVSNPYIENGHTSDTTRPRLAIGLNPGDFPTDAYYYRY |
1OFZ Chain:A ((179-286)) | -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RIYYQATDNKIREHCWDSNSWYVGGFSASASAGVSIAAISWGSTPNIRVYWQKGREELYEAAYGGSWNTPGQIKDASRPTPSLPDTFIAANSSGNIDISVFFQASGVSLQQWQWISGKGWSIGAVVPTGTPAGW--------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1OFZ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 2894 for 657 contacts (4.4/contact) +
2D Compatibility (PS) -11357 + (NN) -6838 + (LL) 9740
1D Compatibility (HY) -3200 + (ID) 1200
Total energy: -9961.0 ( -15.16 by residue)
QMean score : 0.262
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