Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKMTVYFDGNFWLGLIEYDDDGDYKVFRYFFGKEPKDDDVFNFINHKLNDLIKKYEFVKTDISLKRTNEHKKSPKRMQREINREKRKPVVSTKAQLAMKTIHMSIKNERQLSQKCKKNELRKHRYQLKQEKRYQKKKGH |
2L9N Chain:A ((120-153)) | --------------------------------------------------------------------------------VNPETKRPYTVILIERAMKDIHYSVKTNKSTKQQALEVIKQLKEKMKIERAHMRLRFIL |
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General information:
TITO was launched using:
| RESULT:
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Template: 2L9N.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 5436 for 132 contacts (41.2/contact) +
2D Compatibility (PS) -3485 + (NN) -1322 + (LL) 4628
1D Compatibility (HY) -1200 + (ID) 550
Total energy: 3507.0 ( 26.57 by residue)
QMean score : 0.333
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