Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKKNKIIRFSLVGVLLAILCFSLFALLKPNSQQSSSQKLRNEDIKKISSQKRNKKLQLPAVSSKDWNLILVNRDHKHEELSPDVVPVENIYLDKRITKQATQFLEAARAIDSREHLISGYRSVAYQEKLFNSYVTQEMTSNPNLTRGQAEKLVKTYSQPAGASEHQTGLAMDMSTVDSLNESDPRVVSQLKKIAPQYGFVLRFPDGKTAETGVGYEDWHYRYVGVESAKYMAKHHLTLEEYITLLKENNQ |
| 4OXD Chain:A ((22-180)) | -------------------------------------------------------------------IIVAN---KHYPLSKDYNPGENPTAKAELVKLIKAMQEAGFPISDH---YSGFRSYETQTKLYQDYVNQD-----------GKEAADRYSARPGYSEHQTGLAFDVIGTDGDLVTEEKAAQWLLDHAADYGFVVRYLKGKEKETGYMAEEWHLRYVGKE-AKEIAESGLSLEEYYGFEGGDYV |
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General information:
TITO was launched using:
| RESULT:
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Template: 4OXD.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -26057 for 1170 contacts (-22.3/contact) +
2D Compatibility (PS) -16410 + (NN) -2742 + (LL) 5600
1D Compatibility (HY) -7200 + (ID) 3250
Total energy: -50059.0 ( -42.79 by residue)
QMean score : 0.454
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