Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MITQRQNDILNLIVELFTQTHEPVGSKALQRTIESSSATIRNDMAKLEKLGLLEKAHTSSGRMPSPAGFKYFVEHSLRLDSIDEQDIYHVIKAFDFEAFKLEDMLQKASHILSEMTGYTSVILDVEPARQRLTGF--DVVQLSNHDALAVMTLDESKPVTV-QFAIPRNFLTRDLIAFKAIVEERLL---DGSVMDIHYKLRTEIPQIVQKYFVTTDNVLQLFDYVFSELFLETVFVAGKVNSLTYSDLSTYQFLDNEQQVAISLRQGLKEGEMASVQVADSQEAALADVSVLTHKFLIPYRGFGLLSLIGPIDMDYRRSVSLVNIIGKVLAAKLGDYYRYLNSNHYEVH |
| 3PZD Chain:A ((391-511)) | -------------------------------------------------------------------------------------------KWRKFQGMNQEQAMAKYMALIKEWPGYGSTLFDVEC---K---FPQELWLGVSADAVSVYKRGEGRPLEVFQYEHILSFGAPLANTYKIVVDERELLFETSEVVDVAKLMKAYISMIVKKRYST--------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3PZD.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -37725 for 632 contacts (-59.7/contact) +
2D Compatibility (PS) -11828 + (NN) -2353 + (LL) 17504
1D Compatibility (HY) -7200 + (ID) 1600
Total energy: -43202.0 ( -68.36 by residue)
QMean score : 0.164
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