Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MILDYNKLKQETKAIVVDIIERSALKKGQIFVLGLSSSEVSGGLIGKNSSSEIGEIIVEVILKELHSRGIYLAVQGCEHVNRA-----LVVEAELAERQQLEVVNVVPNLHAGGSGQVAAFKLMTSPVE-VEEIVAHAGIDIGDTS-IGMHIKRVQVPLIPISRELGGAHVTALASRPKLIGGARAGYTSDPIRKF |
3G2M Chain:A ((145-260)) | -------------------------------------------------------------LDEADRRGLYASVR--EHLEPGGKFLLSLAMSEAAESEPLER-----------------LHVRHLPAEEIQEITIHPADE--DPFVVCTHRRRLLAP-DQVVRELVRSGFDVIAQTPFASGGAGRKDMVLVEAVM |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3G2M.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -1324 for 436 contacts (-3.0/contact) +
2D Compatibility (PS) -9690 + (NN) 4699 + (LL) 5588
1D Compatibility (HY) 3600 + (ID) 650
Total energy: 2223.0 ( 5.10 by residue)
QMean score : -0.159
|
|
|