Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSHAWKELTFYKKKYLLIELLIIVMMFMVVFLSGLANGLGRAVSAAIENNPAQTYILNEGAEQVITSSVLTTKDQTDLNSLNLKDSTTLNIQRSSLTRQGHEKKIDISYFAIDKDSFMAPTLSEGKQLTSYKKAIILNDSLKAEGIKLGDKVIDKSSSISLTVVGFVHNSMYGHGPVAFIDKDIYTEINKKINPQYQFLPQALVMKNDKSISHLPTQLEAVSKKDVIQHIPGYSAEQSTLNMILWVLVVASAGILGVFFYIITLQKRHEFS--VMKAIGTKMSEIALFQLSQVIILALFGIIVGDGLAIALSYVLPAQMPFVINWQNIILVSFVFLVIAMISSALSIVKVAKIDPVEVINGGGE |
4D1C Chain:A ((122-238)) | -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TWLGALALDEITRLLTGFT------NLPLWIVIFGAIQVVTTFYGITFIRWMNVFASPVLLAMGVYM-----------VYLMLDGADVSLGEVMSMGGENPG-MPF-----STAIMIFVGGWIAVVVSIHDIVKECKVDPNASREGQTK |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4D1C.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -41887 for 537 contacts (-78.0/contact) +
2D Compatibility (PS) -11780 + (NN) -4262 + (LL) 17840
1D Compatibility (HY) -10000 + (ID) 1700
Total energy: -51789.0 ( -96.44 by residue)
QMean score : 0.034
|
|
|