Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MTKLRRFRFPLRFYFTLMFVLTMLFSVLASLLLVAAIVFTFFQGVLTTHVLQVSALAVVFLSLVIASISMWYGSYHLTKPILDISRIVSNVADGDFEGHIYRNSNRRKSYEYYNELDELSESINQMIVSLSHMDHMRKDFITNVSHELKTPIAAVANIVELLQDP--ELDEETQSELLGLVKTESLRLTRLCDTMLQMSRVDNQETIGELSSVRVDEQIRQAMISLTERWQAKRINFQLDSK---PYTVYSNSDLLMQVWINLLDNAIKYS-DDIVD--LRVRMEETNNHYLRVIISDKGRGISQYDVQHIFDKFYQADQSHNQQGNGLGLAIVKRIIVLCKGRISVSSQFEIGTEFCVELPLS |
2C2A Chain:A ((13-246)) | ---------------------------------------------------------------------------------------------------------------------------------LKRIDRMKTEFIANISHELRTPLTAIKAYAETIYNSLGELDLSTLKEFLEVIIDQSNHLENLLNELLDFSRLERKSLQINREKVDLCDLVESAVNAIKEFASSHNVNVLFESNVPCPVEAYIDPTRIRQVLLNLLNNGVKYSKKDAPDKYVKVILDEKDGGVL-IIVEDNGIGIPDHAKDRIFEQFYRVD-------TGLGLAITKEIVELHGGRIWVESEVGKGSRFFVWIPKD |
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General information:
TITO was launched using:
| RESULT:
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Template: 2C2A.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -121309 for 1502 contacts (-80.8/contact) +
2D Compatibility (PS) -23322 + (NN) -10124 + (LL) 12328
1D Compatibility (HY) -19600 + (ID) 3750
Total energy: -165777.0 ( -110.37 by residue)
QMean score : 0.479
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