Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTVKINTRDGQIELSDDVIATVVGGSATEIFGVVGMASKSAIKDNFQALLRKENYAKGVVVRSSEAGIAVDVYTVMSYGVKISEVS-KNIQERVKFNLENQLGLSADMVNVYVQSIKVVGED
3QJ4 Chain:A ((233-274))
------------------------------------------------------------IESS-IGPSLVIHTTVPFGVTYLEHSIEDVQELVFQQLENILPGLPQPIATKCQKWRHSQVT
General information:
TITO was launched using:
RESULT:
Template:
3QJ4.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -10413 for 154 contacts (-67.6/contact) +
2D Compatibility (PS) -4229 + (NN) -257 + (LL) 4416
1D Compatibility (HY) -2400 + (ID) 750
Total energy: -13633.0 ( -88.53 by residue)
QMean score : 0.215
(partial model without unconserved sides chains):
PDB file :
Tito_3QJ4.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3QJ4-query.scw
PDB file :
Tito_Scwrl_3QJ4.pdb
: