Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSLIILTVILVLVIVLLITSLYVVKQQTVAIIERFGKYQKTATSGIHIRVPLGIDKIAARVQLRLLQSEIIVETKTKDNVFVTLNIATQYRVNENNVTDAYYKLIKPEA-QIKSYIEDALRSSVPKLTLDEL-------FEKKDEIALEVQHQVAEEMSTYGYI-----IVKTLITKVEPDAEVKQSMNEINAAQRKR----VAAQELANADKIKIVTAAEAEAEKDRLHGVGIAQQRKAIVDGLADSIQELKDANVTLTEEQIMSIL---LTNQYLDTLNTFAINGNQTIFLPNNPEGVEDIRTQVLSALKTR |
| 4GIJ Chain:A ((29-217)) | --------------------------------------------------------------------------------------------------------ISPELLQISPEVQDALKNKKPVVALESTIISHGMPFPQNAQTAIEVEETIRKQGAVPATIAIIGGVMKVGLSKEEIELLGREGHNVTKVSRRDLPFVVAAGKNGATTVASTMIIAALAGIKVFATGGIGGVHRGAEHTFDISADLQELANTNVTVVCAGAKSILDLGLTTEYLETFGVPLI-GYQTKALPAFFCRTSPFDVSIRLDSASE |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4GIJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) 16167 for 1243 contacts (13.0/contact) +
2D Compatibility (PS) -17217 + (NN) 3642 + (LL) 10800
1D Compatibility (HY) -2400 + (ID) 2350
Total energy: 8642.0 ( 6.95 by residue)
QMean score : 0.205
|
|
|