Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MALSKLDNLYMAVVADHSKHPHHHGFLEGVEQV-QLNNPTCGDVISLSVKFDGNIISDIAFAGNGCTISTASSSMMTDAVIGKTKEEALQLADVFSKMVQGDQNPKQEKLGDAEFLAGVSKFPQRIKCATLSWNALRKAIERDNQAEL
4EB7 Chain:C ((2-114))
---------YSDKVFDHFQNPRNVGKIEDADGVGTV---VCGDLMTIYIKVKDNRIEDIKFQTFGCAAAIATSSMATEMAKGKTIEEALKIT----------------RDAVAEALGGLPK--QKMHCSNLAADALRRAIVDYFRKNG
General information:
TITO was launched using:
RESULT:
Template:
4EB7.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -62920 for 903 contacts (-69.7/contact) +
2D Compatibility (PS) -11270 + (NN) 3 + (LL) 1196
1D Compatibility (HY) -5200 + (ID) 2200
Total energy: -80391.0 ( -89.03 by residue)
QMean score : 0.471
(partial model without unconserved sides chains):
PDB file :
Tito_4EB7.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4EB7-query.scw
PDB file :
Tito_Scwrl_4EB7.pdb
: