Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MPKLIVSFLCILLSLTCVNSVQAEEHKDIMQITREAGYDVKDINKPKASIVIDNK-GHILWEDNADLERDPASMSKMFTLYLLFEDLAKGKTSLNTTVTATET--DQAISKIYEISNNNIHAGVAYPIRELITMTAVPSSNVATIMIANHLSQNNPDAFIKRINETAKKLDMTKTHFYNPSGAVASAFNGLYSPKEYDNNATNVTTARDLSILTYHFLKKYPDILNYTKYPEVKAMVGTPYEETFTTYNYSTPGAKFGL---EGVDGLKTGSSPSAAFNALVTAKRQNTRLITVILGVGDWSDQDGEYYRHPFVNALVEKGFKDAKNISSKTPVLKAVKPKKEVTKTKTKSIQEQPQTKEQWWTKTDQFIQSHFVSILIVLGTIAILCLLAGIVLLIKRSR |
| 4K91 Chain:A ((15-251)) | ----------------------------------------------KSYVLMDGESGQVLVENNGDQRLPPASLTKLMTAYIATKEIEAGRIGENDLVTVSEHAWRTGGSRMF------IKVGSQVSVSDLLHGIIIQSGNDASVALAEHIA-GSEDAFADMMNTTAQKLGLTNSHFMDAT--------GLPNPDHY-------SSARDMAVLARAIIYGEPS--HYAIYA----------QKEFLWNNIKQPNRNLLLWRDKTVDGLKTGHTDEAGYCLVASAVRDGQRMIAVVFGT------NSEQARAAETQKLLTYGFRFFESRNFYKKGTELTKGLVWKGSEHEVKAGLAEDLTMTLPRGQMQKLQASMVLEPQLMAPIQQGQVIGKVEVKLDDKV |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4K91.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -89846 for 2038 contacts (-44.1/contact) +
2D Compatibility (PS) -25126 + (NN) -10933 + (LL) 5588
1D Compatibility (HY) -13600 + (ID) 3600
Total energy: -137517.0 ( -67.48 by residue)
QMean score : 0.490
|
|
|