Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKIGIIGVGKMASAIIQGLKQT----QHDIVISGSCLERSKEIAER-LDVTYAESHQSLINQADIIMLGIKPQLFEKVL--LPLDITKP--IISMAAGISLARLSQLTRSDLP---LIRIMPNINAQILQSCTAICYNNHVSDELRQLTKEITDSFGSSFDIAETNFDTFTALAGSSPAYIYLFIEALAKAGVKYGFPKEQALSIVGQTVLASSQNLLQGQNSTSDLIDNICSPGGTTIAGLLDLEKNGLTHSVISAIDATIEKAKKL |
| 2GR9 Chain:A ((3-270)) | MSVGFIGAGQLAFALAKGFTAAGVLAAHKIMASSPDMDLATVSALRKMGVKLTPHNKETVQHSDVLFLAVKPHIIPFILDEIGADIEDRHIVVSCAAGVTISSIEKKLSAFRPAPRVIRCMTNTPVVVREGATVYATGTHAQVEDGRLMEQLLSSVGFCTEVEEDLIDAVTGLSGSGPAYAFTALDALADGGVKMGLPRRLAVRLGAQALLGAAKMLLHSEQHPGQLKDNVSSPGGATIHALHVLESGGFRSLLINAVEASCIRTREL |
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General information:
TITO was launched using:
| RESULT:
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Template: 2GR9.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -153915 for 1935 contacts (-79.5/contact) +
2D Compatibility (PS) -27503 + (NN) -8716 + (LL) 0
1D Compatibility (HY) -17600 + (ID) 3750
Total energy: -211484.0 ( -109.29 by residue)
QMean score : 0.458
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